Spring
2009
ECE598: SPECIAL TOPICS IN LIGHT MICROSCOPY
Text (optional): “Fundamentals of Light Microscopy and Electronic
Imaging”, D. B. Murphy, 2001 (Wiley-Liss, 1st edition)
Schedule: 14-15:20 T-R, 241 Everitt Lab
Office Hours: 2-4 Fridays, 4055 Beckman;
REGISTER NOW for the 2009 Nano-Biophotonics Summer School
Grading formula: Midterm 20%, Homework 20%, Project Presentation 20%, Project Report
40%, Class participation 10% (bonus)
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Date |
Comments |
Topic |
Video recordings |
Supporting Material |
Homework |
Links |
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Jan 20 |
Introduction |
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Math
review (ECE460) |
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Jan 22 |
Math review |
Lecture 2 |
Appendix: Math
review |
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Jan 27 |
No lecture |
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Jan 29 |
No lecture |
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Fourier pairs-
Wikipedia |
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Feb 03 |
Properties of Light |
Lecture 3 |
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Feb 05 |
Properties of Light |
Lecture 4 |
Electromagnetic
spectrum- Wikipedia |
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Feb 10 |
Statistical Optics |
Lecture 5 |
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R. J. Glauber- Nobel Lecture |
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Feb 12 |
Gaussian Optics |
Lecture 6 |
Fermat’s Principle-
Wikipedia |
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Feb 17 |
Gaussian Optics |
Lecture 7 |
Carl
Friedrich Gauss- Wikipedia |
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Feb 19 |
Fourier Optics |
Lecture 8 |
Joseph
Fourier- Wikipedia; Fourier transform-
Wolfram |
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Feb 24 |
Fourier Optics |
Lecture 9 |
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Feb 26 |
Elastic light scattering |
Lecture 10 |
ImageJ- free download;
Image
processing fundamentals |
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Mar 03 |
Elastic light scattering |
Lecture 11 |
Scattering-
Wikipedia |
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Mar 05 |
Dynamic Light Scattering |
Lecture 12 |
DLS-
Wikipedia |
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Mar 10 |
Dynamic Light Scattering |
Lecture 13 |
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Mar 12 |
Microrheology |
Lecture 14 |
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Mar 17 |
Exam review |
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Mar 19 |
Midterm |
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Mar 24 |
Break |
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Mar 26 |
Break |
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Mar 31 |
Traditional Microscopy (intrinsic contrast) |
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Microscopy-
Wikipedia |
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Apr 02 |
Traditional Microscopy (extrinsic contrast) |
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Apr 07 |
Interference microscopy |
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Nikon- MicroscopyU |
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Apr 09 |
Quantitative Phase Microscopy |
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Apr 14 |
1.
CARS
by Charles Fang ·
ISAM
by Dr. Steven G. Adie (cancelled)
·
MagnetoMotive
Optical Coherence Tomography by
Dr. Renu John |
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Peer evaluation form- new |
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Apr 16 |
2.
Digital holographic
microscopy by Santoshi Tripathi 3.
FRET by Chun Ge 4.
STORM by Sungwan Shin |
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Apr 21 |
5.
Deconvolution
microscopy by Zhuo Wang 6.
SHGM by
Daren Whitlock |
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Apr 23 |
7.
NSOM
by Kashif Altaf 8.
Nonlinear structured illumination
microscopy by Raghu Ambekar 9.
TIRF by Mustafa Mir |
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Apr 28 |
10.
STED by Budiman
Dabarsyah 11.
FIONA by Markita
Landry ·
Evaluation forms |
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Apr 30 |
12.
Optical coherence microscopy (OCM) by Shu Zhang 13.
Fluorescence correlation spectroscopy
(FCS) by Ru Wang 14.
Single-molecule
high-resolution colocalization (SHREC) by Vikram Chaudhery, |
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May 05 |
15.
Apertureless NSOM
(ANSOM) by Wladimir Benalcazar ·
Fabrication of
Photonic Crystals Using Holographic Lithography Method by Dr. Jun Xu ·
ISAM
by Dr. Steven G. Adie |
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May 07 |
Reading Day |
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May 12 |
Reports Due |
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May 14 |
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